dbCAN Logo

Cluster: CGMR014146_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_324986 k141_324986_29 40024 42501 + GT35
pfam k141_324986 k141_324986_30 42619 43557 + SpoIID
STP k141_324986 k141_324986_31 43771 44832 + Peptidase_M23
TC k141_324986 k141_324986_32 44921 47005 - 1.B.52.2.2
pfam k141_324986 k141_324986_33 47230 50667 + SNF2-rel_dom | DEAD | Helicase_C | ResIII | SNF2_assoc
TC k141_324986 k141_324986_34 51233 51919 + 1.C.113.1.3
TF k141_324986 k141_324986_35 51949 52773 - HTH_AraC
CAZyme k141_324986 k141_324986_36 53034 55550 + GH2
CAZyme k141_324986 k141_324986_37 55629 59384 + GH115
TC k141_324986 k141_324986_38 59386 60756 + 2.A.66.1.33
Gene ID: k141_324986_29
Type: CAZyme
Location: 40024 - 42501 (+)
Gene ID: k141_324986_30
Type: pfam
Location: 42619 - 43557 (+)
Gene ID: k141_324986_31
Type: STP
Location: 43771 - 44832 (+)
Gene ID: k141_324986_32
Type: TC
Location: 44921 - 47005 (-)
Gene ID: k141_324986_33
Type: pfam
Location: 47230 - 50667 (+)
Gene ID: k141_324986_34
Type: TC
Location: 51233 - 51919 (+)
Gene ID: k141_324986_35
Type: TF
Location: 51949 - 52773 (-)
Gene ID: k141_324986_36
Type: CAZyme
Location: 53034 - 55550 (+)
Gene ID: k141_324986_37
Type: CAZyme
Location: 55629 - 59384 (+)
Gene ID: k141_324986_38
Type: TC
Location: 59386 - 60756 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List