Cluster: CGMR014004_CGC47
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR014004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_164717 | k141_164717_8 | 12453 | 14027 | + | GT83 |
| CAZyme | k141_164717 | k141_164717_9 | 14156 | 16036 | + | GH20 |
| pfam | k141_164717 | k141_164717_10 | 16182 | 17996 | + | tRNA-synt_2 | tRNA_anti-codon | GAD |
| NULL(UNKNOWN) | k141_164717 | k141_164717_11 | 18032 | 19033 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_164717 | k141_164717_12 | 19050 | 19667 | + | GH23 |
| pfam | k141_164717 | k141_164717_13 | 19678 | 20418 | + | DUF3047 |
| pfam | k141_164717 | k141_164717_14 | 20415 | 20612 | + | TatA_B_E |
| TC | k141_164717 | k141_164717_15 | 20624 | 21517 | + | 2.A.64.1.1 |
Gene ID: k141_164717_8
Type: CAZyme
Location: 12453 - 14027 (+)
Type: CAZyme
Location: 12453 - 14027 (+)
Gene ID: k141_164717_9
Type: CAZyme
Location: 14156 - 16036 (+)
Type: CAZyme
Location: 14156 - 16036 (+)
Gene ID: k141_164717_10
Type: pfam
Location: 16182 - 17996 (+)
Type: pfam
Location: 16182 - 17996 (+)
Gene ID: k141_164717_11
Type:
Location: 18032 - 19033 (+)
Type:
Location: 18032 - 19033 (+)
Gene ID: k141_164717_12
Type: CAZyme
Location: 19050 - 19667 (+)
Type: CAZyme
Location: 19050 - 19667 (+)
Gene ID: k141_164717_13
Type: pfam
Location: 19678 - 20418 (+)
Type: pfam
Location: 19678 - 20418 (+)
Gene ID: k141_164717_14
Type: pfam
Location: 20415 - 20612 (+)
Type: pfam
Location: 20415 - 20612 (+)
Gene ID: k141_164717_15
Type: TC
Location: 20624 - 21517 (+)
Type: TC
Location: 20624 - 21517 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
CALXOD01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.