Cluster: CGMR014004_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR014004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_148606 | k141_148606_26 | 32340 | 33002 | - | 1.A.16.5.2 |
| TF | k141_148606 | k141_148606_27 | 33203 | 34270 | + | GntR |
| NULL(UNKNOWN) | k141_148606 | k141_148606_28 | 34275 | 34625 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_148606 | k141_148606_29 | 34622 | 35620 | - | 3.A.1.7.1 |
| pfam | k141_148606 | k141_148606_30 | 35642 | 37231 | - | Secretin |
| pfam | k141_148606 | k141_148606_31 | 37251 | 38714 | - | Secretin |
| CAZyme | k141_148606 | k141_148606_32 | 39028 | 40965 | + | CE7 |
Gene ID: k141_148606_26
Type: TC
Location: 32340 - 33002 (-)
Type: TC
Location: 32340 - 33002 (-)
Gene ID: k141_148606_27
Type: TF
Location: 33203 - 34270 (+)
Type: TF
Location: 33203 - 34270 (+)
Gene ID: k141_148606_28
Type:
Location: 34275 - 34625 (-)
Type:
Location: 34275 - 34625 (-)
Gene ID: k141_148606_29
Type: TC
Location: 34622 - 35620 (-)
Type: TC
Location: 34622 - 35620 (-)
Gene ID: k141_148606_30
Type: pfam
Location: 35642 - 37231 (-)
Type: pfam
Location: 35642 - 37231 (-)
Gene ID: k141_148606_31
Type: pfam
Location: 37251 - 38714 (-)
Type: pfam
Location: 37251 - 38714 (-)
Gene ID: k141_148606_32
Type: CAZyme
Location: 39028 - 40965 (+)
Type: CAZyme
Location: 39028 - 40965 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
Victivallaceae
Genus
CALXOD01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.