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Cluster: CGMR014004_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_255345 k141_255345_35 42938 44107 - GH177
TF k141_255345 k141_255345_36 44244 45044 + HTH_AraC | HTH_AraC
pfam k141_255345 k141_255345_37 45056 46216 - Methyltransf_32 | Methyltransf_31
TC k141_255345 k141_255345_38 46361 47119 + 2.A.102.2.5
NULL(UNKNOWN) k141_255345 k141_255345_39 47151 48737 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_255345 k141_255345_40 48763 50358 + GT83
peptidase k141_255345 k141_255345_41 50301 52181 - C44.UPW
CAZyme k141_255345 k141_255345_42 52323 54449 + GH35
Gene ID: k141_255345_35
Type: CAZyme
Location: 42938 - 44107 (-)
Gene ID: k141_255345_36
Type: TF
Location: 44244 - 45044 (+)
Gene ID: k141_255345_37
Type: pfam
Location: 45056 - 46216 (-)
Gene ID: k141_255345_38
Type: TC
Location: 46361 - 47119 (+)
Gene ID: k141_255345_39
Type:
Location: 47151 - 48737 (+)
Gene ID: k141_255345_40
Type: CAZyme
Location: 48763 - 50358 (+)
Gene ID: k141_255345_41
Type: peptidase
Location: 50301 - 52181 (-)
Gene ID: k141_255345_42
Type: CAZyme
Location: 52323 - 54449 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Verrucomicrobiota
→
Class
Lentisphaeria
→
Order
Victivallales
→
Family
Victivallaceae
→
Genus
CALXOD01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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