Cluster: CGMR013882_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR013882
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10378 | k141_10378_18 | 21247 | 22893 | - | GH172 |
| CAZyme | k141_10378 | k141_10378_19 | 23324 | 24292 | - | GH43_31 |
| CAZyme | k141_10378 | k141_10378_20 | 24294 | 27077 | - | GH43_31 |
| pfam | k141_10378 | k141_10378_21 | 27132 | 28376 | - | SusD_RagB | SusD-like_3 |
| TC | k141_10378 | k141_10378_22 | 28718 | 30823 | - | 1.B.14.6.1 |
Gene ID: k141_10378_18
Type: CAZyme
Location: 21247 - 22893 (-)
Type: CAZyme
Location: 21247 - 22893 (-)
Gene ID: k141_10378_19
Type: CAZyme
Location: 23324 - 24292 (-)
Type: CAZyme
Location: 23324 - 24292 (-)
Gene ID: k141_10378_20
Type: CAZyme
Location: 24294 - 27077 (-)
Type: CAZyme
Location: 24294 - 27077 (-)
Gene ID: k141_10378_21
Type: pfam
Location: 27132 - 28376 (-)
Type: pfam
Location: 27132 - 28376 (-)
Gene ID: k141_10378_22
Type: TC
Location: 28718 - 30823 (-)
Type: TC
Location: 28718 - 30823 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea symbiosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.