Cluster: CGMR013882_CGC20
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR013882
- CGC Family ID: CGCFAM_05412
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_28730 | k141_28730_3 | 1519 | 4332 | - | GT51 |
| pfam | k141_28730 | k141_28730_4 | 4560 | 5195 | + | Mntp |
| TC | k141_28730 | k141_28730_5 | 5223 | 7868 | - | 3.A.3.2.21 |
| STP | k141_28730 | k141_28730_6 | 8148 | 8558 | - | Nitro_FeMo-Co |
| STP | k141_28730 | k141_28730_7 | 8650 | 9039 | - | Sigma70_r4_2 |
| TC | k141_28730 | k141_28730_8 | 9128 | 10843 | - | 3.A.1.5.22 |
| TC | k141_28730 | k141_28730_9 | 10924 | 11982 | - | 3.A.1.5.20 |
| TC | k141_28730 | k141_28730_10 | 11982 | 12986 | - | 3.A.1.5.2 |
| TC | k141_28730 | k141_28730_11 | 12999 | 14039 | - | 3.A.1.5.2 |
| TC | k141_28730 | k141_28730_12 | 14053 | 14970 | - | 3.A.1.5.2 |
| TF | k141_28730 | k141_28730_13 | 15361 | 16071 | - | GntR |
| pfam | k141_28730 | k141_28730_14 | 16176 | 17057 | - | AP_endonuc_2 |
| TC | k141_28730 | k141_28730_15 | 17122 | 18417 | - | 2.A.56.1.4 |
Gene ID: k141_28730_3
Type: CAZyme
Location: 1519 - 4332 (-)
Type: CAZyme
Location: 1519 - 4332 (-)
Gene ID: k141_28730_4
Type: pfam
Location: 4560 - 5195 (+)
Type: pfam
Location: 4560 - 5195 (+)
Gene ID: k141_28730_5
Type: TC
Location: 5223 - 7868 (-)
Type: TC
Location: 5223 - 7868 (-)
Gene ID: k141_28730_6
Type: STP
Location: 8148 - 8558 (-)
Type: STP
Location: 8148 - 8558 (-)
Gene ID: k141_28730_7
Type: STP
Location: 8650 - 9039 (-)
Type: STP
Location: 8650 - 9039 (-)
Gene ID: k141_28730_8
Type: TC
Location: 9128 - 10843 (-)
Type: TC
Location: 9128 - 10843 (-)
Gene ID: k141_28730_9
Type: TC
Location: 10924 - 11982 (-)
Type: TC
Location: 10924 - 11982 (-)
Gene ID: k141_28730_10
Type: TC
Location: 11982 - 12986 (-)
Type: TC
Location: 11982 - 12986 (-)
Gene ID: k141_28730_11
Type: TC
Location: 12999 - 14039 (-)
Type: TC
Location: 12999 - 14039 (-)
Gene ID: k141_28730_12
Type: TC
Location: 14053 - 14970 (-)
Type: TC
Location: 14053 - 14970 (-)
Gene ID: k141_28730_13
Type: TF
Location: 15361 - 16071 (-)
Type: TF
Location: 15361 - 16071 (-)
Gene ID: k141_28730_14
Type: pfam
Location: 16176 - 17057 (-)
Type: pfam
Location: 16176 - 17057 (-)
Gene ID: k141_28730_15
Type: TC
Location: 17122 - 18417 (-)
Type: TC
Location: 17122 - 18417 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea symbiosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.