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Cluster: CGMR013881_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_76373 k141_76373_4 3173 4162 + GT2
CAZyme k141_76373 k141_76373_5 4170 5138 + GT2
TC k141_76373 k141_76373_6 5197 6234 - 3.A.1.11.1
TC k141_76373 k141_76373_7 6282 7067 - 3.A.1.11.2
TC k141_76373 k141_76373_8 7083 7949 - 3.A.1.11.1
TC k141_76373 k141_76373_9 7962 9035 - 3.A.1.11.1
TC k141_76373 k141_76373_10 9231 9818 + 9.B.18.1.3
pfam k141_76373 k141_76373_11 9815 10672 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme k141_76373 k141_76373_12 10666 11736 + GT4
TC k141_76373 k141_76373_13 11866 13278 + 2.A.66.1.45
Gene ID: k141_76373_4
Type: CAZyme
Location: 3173 - 4162 (+)
Gene ID: k141_76373_5
Type: CAZyme
Location: 4170 - 5138 (+)
Gene ID: k141_76373_6
Type: TC
Location: 5197 - 6234 (-)
Gene ID: k141_76373_7
Type: TC
Location: 6282 - 7067 (-)
Gene ID: k141_76373_8
Type: TC
Location: 7083 - 7949 (-)
Gene ID: k141_76373_9
Type: TC
Location: 7962 - 9035 (-)
Gene ID: k141_76373_10
Type: TC
Location: 9231 - 9818 (+)
Gene ID: k141_76373_11
Type: pfam
Location: 9815 - 10672 (+)
Gene ID: k141_76373_12
Type: CAZyme
Location: 10666 - 11736 (+)
Gene ID: k141_76373_13
Type: TC
Location: 11866 - 13278 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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