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Cluster: CGMR013881_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_83323 k141_83323_1 3 635 + 3.A.1.1.4
TC k141_83323 k141_83323_2 632 1486 + 3.A.1.1.39
pfam k141_83323 k141_83323_3 1507 2583 + ADH_zinc_N | ADH_N
CAZyme k141_83323 k141_83323_4 2604 3596 + GH109
STP k141_83323 k141_83323_5 3903 4637 + dCache_1
TC k141_83323 k141_83323_6 4755 5681 + 8.A.59.2.1
TF k141_83323 k141_83323_7 5678 6415 + HTH_AraC
STP k141_83323 k141_83323_8 6528 7841 + SBP_bac_1
TC k141_83323 k141_83323_9 7910 8818 + 3.A.1.1.20
TC k141_83323 k141_83323_10 8815 9669 + 3.A.1.1.26
CAZyme k141_83323 k141_83323_11 9714 11834 + CBM66
Gene ID: k141_83323_1
Type: TC
Location: 3 - 635 (+)
Gene ID: k141_83323_2
Type: TC
Location: 632 - 1486 (+)
Gene ID: k141_83323_3
Type: pfam
Location: 1507 - 2583 (+)
Gene ID: k141_83323_4
Type: CAZyme
Location: 2604 - 3596 (+)
Gene ID: k141_83323_5
Type: STP
Location: 3903 - 4637 (+)
Gene ID: k141_83323_6
Type: TC
Location: 4755 - 5681 (+)
Gene ID: k141_83323_7
Type: TF
Location: 5678 - 6415 (+)
Gene ID: k141_83323_8
Type: STP
Location: 6528 - 7841 (+)
Gene ID: k141_83323_9
Type: TC
Location: 7910 - 8818 (+)
Gene ID: k141_83323_10
Type: TC
Location: 8815 - 9669 (+)
Gene ID: k141_83323_11
Type: CAZyme
Location: 9714 - 11834 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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