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Cluster: CGMR013612_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_139951 k141_139951_9 7410 8966 + 3.A.1.2.12
pfam k141_139951 k141_139951_10 8959 10050 + BPD_transp_2
TC k141_139951 k141_139951_11 10052 10963 + 3.A.1.2.18
pfam k141_139951 k141_139951_12 10983 11969 + IU_nuc_hydro
sulfatase k141_139951 k141_139951_13 11987 12982 + S1_46
CAZyme k141_139951 k141_139951_14 13696 15540 + GH13_11
pfam k141_139951 k141_139951_15 15527 16087 + DUF5662
TC k141_139951 k141_139951_16 16144 16530 + 1.E.14.1.1
TC k141_139951 k141_139951_17 16523 17215 + 2.A.122.1.4
Gene ID: k141_139951_9
Type: TC
Location: 7410 - 8966 (+)
Gene ID: k141_139951_10
Type: pfam
Location: 8959 - 10050 (+)
Gene ID: k141_139951_11
Type: TC
Location: 10052 - 10963 (+)
Gene ID: k141_139951_12
Type: pfam
Location: 10983 - 11969 (+)
Gene ID: k141_139951_13
Type: sulfatase
Location: 11987 - 12982 (+)
Gene ID: k141_139951_14
Type: CAZyme
Location: 13696 - 15540 (+)
Gene ID: k141_139951_15
Type: pfam
Location: 15527 - 16087 (+)
Gene ID: k141_139951_16
Type: TC
Location: 16144 - 16530 (+)
Gene ID: k141_139951_17
Type: TC
Location: 16523 - 17215 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_139951_17 vegetarian > vegan 1.29877 0.01315

🧭 Explore Read Mapping of CGC

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