Cluster: CGMR013612_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: CGMR013612
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_198737 | k141_198737_8 | 7216 | 8586 | + | 3.A.1.1.45 |
| TC | k141_198737 | k141_198737_9 | 8660 | 9511 | + | 3.A.1.1.45 |
| TC | k141_198737 | k141_198737_10 | 9513 | 10355 | + | 3.A.1.1.45 |
| TF | k141_198737 | k141_198737_11 | 10366 | 11382 | + | LacI |
| TC | k141_198737 | k141_198737_12 | 11405 | 12502 | + | 3.A.1.1.26 |
| CAZyme | k141_198737 | k141_198737_13 | 12531 | 14024 | + | GH77 |
Gene ID: k141_198737_8
Type: TC
Location: 7216 - 8586 (+)
Type: TC
Location: 7216 - 8586 (+)
Gene ID: k141_198737_9
Type: TC
Location: 8660 - 9511 (+)
Type: TC
Location: 8660 - 9511 (+)
Gene ID: k141_198737_10
Type: TC
Location: 9513 - 10355 (+)
Type: TC
Location: 9513 - 10355 (+)
Gene ID: k141_198737_11
Type: TF
Location: 10366 - 11382 (+)
Type: TF
Location: 10366 - 11382 (+)
Gene ID: k141_198737_12
Type: TC
Location: 11405 - 12502 (+)
Type: TC
Location: 11405 - 12502 (+)
Gene ID: k141_198737_13
Type: CAZyme
Location: 12531 - 14024 (+)
Type: CAZyme
Location: 12531 - 14024 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.