Cluster: CGMR013612_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR013612
- CGC Family ID: CGCFAM_05410
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_186312 | k141_186312_38 | 38175 | 38798 | + | CE4 |
| STP | k141_186312 | k141_186312_39 | 38800 | 40182 | + | AAA |
| pfam | k141_186312 | k141_186312_40 | 40239 | 40928 | - | Amidase_3 | SPOR |
| TC | k141_186312 | k141_186312_41 | 41069 | 41983 | + | 2.A.7.3.65 |
Gene ID: k141_186312_38
Type: CAZyme
Location: 38175 - 38798 (+)
Type: CAZyme
Location: 38175 - 38798 (+)
Gene ID: k141_186312_39
Type: STP
Location: 38800 - 40182 (+)
Type: STP
Location: 38800 - 40182 (+)
Gene ID: k141_186312_40
Type: pfam
Location: 40239 - 40928 (-)
Type: pfam
Location: 40239 - 40928 (-)
Gene ID: k141_186312_41
Type: TC
Location: 41069 - 41983 (+)
Type: TC
Location: 41069 - 41983 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_186312_38 | vegetarian > omnivore | 1.53665 | 0.01465 |
| k141_186312_38 | vegetarian > vegan | 1.86813 | 0.01315 |