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Cluster: CGMR013612_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16611 k141_16611_5 3337 3729 + 4.A.6.1.16
TC k141_16611 k141_16611_6 3793 4266 + 4.A.6.1.17
pfam k141_16611 k141_16611_7 4272 4688 + EIIA-man
TC k141_16611 k141_16611_8 4690 5181 + 4.A.6.1.17
TC k141_16611 k141_16611_9 5196 5936 + 4.A.6.1.17
TC k141_16611 k141_16611_10 5951 6793 + 4.A.6.1.17
NULL(UNKNOWN) k141_16611 k141_16611_11 6818 9082 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_16611 k141_16611_12 9238 10356 - GH172
pfam k141_16611 k141_16611_13 10605 11960 + Sigma54_AID | Sigma54_DBD | Sigma54_CBD
pfam k141_16611 k141_16611_14 12033 12746 - Methyltransf_2 | CMAS | MTS | PrmA | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC k141_16611 k141_16611_15 13180 15021 + 3.A.1.120.6
Gene ID: k141_16611_5
Type: TC
Location: 3337 - 3729 (+)
Gene ID: k141_16611_6
Type: TC
Location: 3793 - 4266 (+)
Gene ID: k141_16611_7
Type: pfam
Location: 4272 - 4688 (+)
Gene ID: k141_16611_8
Type: TC
Location: 4690 - 5181 (+)
Gene ID: k141_16611_9
Type: TC
Location: 5196 - 5936 (+)
Gene ID: k141_16611_10
Type: TC
Location: 5951 - 6793 (+)
Gene ID: k141_16611_11
Type:
Location: 6818 - 9082 (+)
Gene ID: k141_16611_12
Type: CAZyme
Location: 9238 - 10356 (-)
Gene ID: k141_16611_13
Type: pfam
Location: 10605 - 11960 (+)
Gene ID: k141_16611_14
Type: pfam
Location: 12033 - 12746 (-)
Gene ID: k141_16611_15
Type: TC
Location: 13180 - 15021 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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