Cluster: CGMR013612_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR013612
- CGC Family ID: CGCFAM_02056
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_190935 | k141_190935_79 | 94971 | 95294 | - | 4.A.3.2.8 |
| TC | k141_190935 | k141_190935_80 | 95299 | 95598 | - | 4.A.3.2.2 |
| TF | k141_190935 | k141_190935_81 | 95676 | 96389 | + | HTH_6 |
| CAZyme | k141_190935 | k141_190935_82 | 96614 | 98020 | + | GH4 |
| TC | k141_190935 | k141_190935_83 | 98039 | 99337 | + | 4.A.3.2.2 |
Gene ID: k141_190935_79
Type: TC
Location: 94971 - 95294 (-)
Type: TC
Location: 94971 - 95294 (-)
Gene ID: k141_190935_80
Type: TC
Location: 95299 - 95598 (-)
Type: TC
Location: 95299 - 95598 (-)
Gene ID: k141_190935_81
Type: TF
Location: 95676 - 96389 (+)
Type: TF
Location: 95676 - 96389 (+)
Gene ID: k141_190935_82
Type: CAZyme
Location: 96614 - 98020 (+)
Type: CAZyme
Location: 96614 - 98020 (+)
Gene ID: k141_190935_83
Type: TC
Location: 98039 - 99337 (+)
Type: TC
Location: 98039 - 99337 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola filiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_190935_80 | vegetarian > vegan | 1.83194 | 0.01315 |