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Cluster: CGMR013555_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_32002 k141_32002_4 1988 3181 - GT2
NULL(UNKNOWN) k141_32002 k141_32002_5 3178 3588 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_32002 k141_32002_6 3606 4226 - Toprim | RecR_ZnF | Toprim_4 | RecR_C | RecR_HhH
CAZyme k141_32002 k141_32002_7 4509 6329 - GH110
STP k141_32002 k141_32002_8 6581 7873 - PALP
pfam k141_32002 k141_32002_9 7876 8808 - GHMP_kinases_N | GHMP_kinases_C
TC k141_32002 k141_32002_10 9598 11391 + 2.A.81.1.2
CAZyme k141_32002 k141_32002_11 11476 14133 - GH43_3
Gene ID: k141_32002_4
Type: CAZyme
Location: 1988 - 3181 (-)
Gene ID: k141_32002_5
Type:
Location: 3178 - 3588 (-)
Gene ID: k141_32002_6
Type: pfam
Location: 3606 - 4226 (-)
Gene ID: k141_32002_7
Type: CAZyme
Location: 4509 - 6329 (-)
Gene ID: k141_32002_8
Type: STP
Location: 6581 - 7873 (-)
Gene ID: k141_32002_9
Type: pfam
Location: 7876 - 8808 (-)
Gene ID: k141_32002_10
Type: TC
Location: 9598 - 11391 (+)
Gene ID: k141_32002_11
Type: CAZyme
Location: 11476 - 14133 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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