Cluster: CGMR013325_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR013325
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_258180 | k141_258180_34 | 34795 | 35385 | + | 3.A.1.105.4 |
| TC | k141_258180 | k141_258180_35 | 35401 | 36897 | + | 3.A.1.105.15 |
| TC | k141_258180 | k141_258180_36 | 36899 | 38008 | + | 3.A.1.105.15 |
| TC | k141_258180 | k141_258180_37 | 38001 | 39110 | + | 3.A.1.105.15 |
| CAZyme | k141_258180 | k141_258180_38 | 39270 | 40145 | + | GT101 |
| pfam | k141_258180 | k141_258180_39 | 40202 | 41065 | + | Epimerase |
| CAZyme | k141_258180 | k141_258180_40 | 41058 | 42554 | + | GT2 |
Gene ID: k141_258180_34
Type: TC
Location: 34795 - 35385 (+)
Type: TC
Location: 34795 - 35385 (+)
Gene ID: k141_258180_35
Type: TC
Location: 35401 - 36897 (+)
Type: TC
Location: 35401 - 36897 (+)
Gene ID: k141_258180_36
Type: TC
Location: 36899 - 38008 (+)
Type: TC
Location: 36899 - 38008 (+)
Gene ID: k141_258180_37
Type: TC
Location: 38001 - 39110 (+)
Type: TC
Location: 38001 - 39110 (+)
Gene ID: k141_258180_38
Type: CAZyme
Location: 39270 - 40145 (+)
Type: CAZyme
Location: 39270 - 40145 (+)
Gene ID: k141_258180_39
Type: pfam
Location: 40202 - 41065 (+)
Type: pfam
Location: 40202 - 41065 (+)
Gene ID: k141_258180_40
Type: CAZyme
Location: 41058 - 42554 (+)
Type: CAZyme
Location: 41058 - 42554 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp944393665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.