Cluster: CGMR013325_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR013325
- CGC Family ID: CGCFAM_08265
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_231519 | k141_231519_7 | 7735 | 8994 | + | GT30 |
| pfam | k141_231519 | k141_231519_8 | 8996 | 9946 | + | LpxK |
| pfam | k141_231519 | k141_231519_9 | 9953 | 10642 | - | zf-CDGSH | zf-CDGSH |
| TC | k141_231519 | k141_231519_10 | 10642 | 11553 | - | 8.A.5.1.4 |
Gene ID: k141_231519_7
Type: CAZyme
Location: 7735 - 8994 (+)
Type: CAZyme
Location: 7735 - 8994 (+)
Gene ID: k141_231519_8
Type: pfam
Location: 8996 - 9946 (+)
Type: pfam
Location: 8996 - 9946 (+)
Gene ID: k141_231519_9
Type: pfam
Location: 9953 - 10642 (-)
Type: pfam
Location: 9953 - 10642 (-)
Gene ID: k141_231519_10
Type: TC
Location: 10642 - 11553 (-)
Type: TC
Location: 10642 - 11553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp944393665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.