Cluster: CGMR013325_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR013325
- CGC Family ID: CGCFAM_00472
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_46307 | k141_46307_7 | 12462 | 14609 | - | GH77 |
| CAZyme | k141_46307 | k141_46307_8 | 14632 | 16713 | - | GH13_11 |
| CAZyme | k141_46307 | k141_46307_9 | 16732 | 18924 | - | CBM48 | GH13_9 |
| pfam | k141_46307 | k141_46307_10 | 19151 | 19411 | + | DUF2934 |
| STP | k141_46307 | k141_46307_11 | 19481 | 20704 | - | TPR_1 | TPR_1 |
| TC | k141_46307 | k141_46307_12 | 20803 | 22140 | + | 2.A.66.1.28 |
Gene ID: k141_46307_7
Type: CAZyme
Location: 12462 - 14609 (-)
Type: CAZyme
Location: 12462 - 14609 (-)
Gene ID: k141_46307_8
Type: CAZyme
Location: 14632 - 16713 (-)
Type: CAZyme
Location: 14632 - 16713 (-)
Gene ID: k141_46307_9
Type: CAZyme
Location: 16732 - 18924 (-)
Type: CAZyme
Location: 16732 - 18924 (-)
Gene ID: k141_46307_10
Type: pfam
Location: 19151 - 19411 (+)
Type: pfam
Location: 19151 - 19411 (+)
Gene ID: k141_46307_11
Type: STP
Location: 19481 - 20704 (-)
Type: STP
Location: 19481 - 20704 (-)
Gene ID: k141_46307_12
Type: TC
Location: 20803 - 22140 (+)
Type: TC
Location: 20803 - 22140 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp944393665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.