Cluster: CGMR013325_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR013325
- CGC Family ID: CGCFAM_00661
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_444536 | k141_444536_25 | 27596 | 28114 | - | 2.A.51.1.6 |
| TC | k141_444536 | k141_444536_26 | 28111 | 28647 | - | 2.A.51.1.6 |
| TC | k141_444536 | k141_444536_27 | 28730 | 29845 | + | 3.D.2.2.1 |
| TC | k141_444536 | k141_444536_28 | 29850 | 30134 | + | 3.D.2.2.1 |
| TC | k141_444536 | k141_444536_29 | 30134 | 31498 | + | 3.D.2.2.1 |
| NULL(UNKNOWN) | k141_444536 | k141_444536_30 | 31538 | 32218 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_444536 | k141_444536_31 | 32452 | 32871 | + | GtrA_DPMS_TM |
| CAZyme | k141_444536 | k141_444536_32 | 32868 | 33953 | + | GT2 |
Gene ID: k141_444536_25
Type: TC
Location: 27596 - 28114 (-)
Type: TC
Location: 27596 - 28114 (-)
Gene ID: k141_444536_26
Type: TC
Location: 28111 - 28647 (-)
Type: TC
Location: 28111 - 28647 (-)
Gene ID: k141_444536_27
Type: TC
Location: 28730 - 29845 (+)
Type: TC
Location: 28730 - 29845 (+)
Gene ID: k141_444536_28
Type: TC
Location: 29850 - 30134 (+)
Type: TC
Location: 29850 - 30134 (+)
Gene ID: k141_444536_29
Type: TC
Location: 30134 - 31498 (+)
Type: TC
Location: 30134 - 31498 (+)
Gene ID: k141_444536_30
Type:
Location: 31538 - 32218 (-)
Type:
Location: 31538 - 32218 (-)
Gene ID: k141_444536_31
Type: pfam
Location: 32452 - 32871 (+)
Type: pfam
Location: 32452 - 32871 (+)
Gene ID: k141_444536_32
Type: CAZyme
Location: 32868 - 33953 (+)
Type: CAZyme
Location: 32868 - 33953 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAZU01
Species
CAZU01 sp944393665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.