Cluster: CGMR013232_CGC28
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR013232
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_243557 | k141_243557_1 | 3 | 1091 | + | GH39 |
| NULL(UNKNOWN) | k141_243557 | k141_243557_2 | 1104 | 1847 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_243557 | k141_243557_3 | 2120 | 3754 | + | SBP_bac_1 |
| CAZyme | k141_243557 | k141_243557_4 | 3860 | 4714 | + | CE1 |
| pfam | k141_243557 | k141_243557_5 | 4832 | 5674 | + | VCA0040-like |
| TC | k141_243557 | k141_243557_6 | 6280 | 7665 | + | 9.A.40.2.2 |
Gene ID: k141_243557_1
Type: CAZyme
Location: 3 - 1091 (+)
Type: CAZyme
Location: 3 - 1091 (+)
Gene ID: k141_243557_2
Type:
Location: 1104 - 1847 (-)
Type:
Location: 1104 - 1847 (-)
Gene ID: k141_243557_3
Type: STP
Location: 2120 - 3754 (+)
Type: STP
Location: 2120 - 3754 (+)
Gene ID: k141_243557_4
Type: CAZyme
Location: 3860 - 4714 (+)
Type: CAZyme
Location: 3860 - 4714 (+)
Gene ID: k141_243557_5
Type: pfam
Location: 4832 - 5674 (+)
Type: pfam
Location: 4832 - 5674 (+)
Gene ID: k141_243557_6
Type: TC
Location: 6280 - 7665 (+)
Type: TC
Location: 6280 - 7665 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Catenibacillus
Species
Catenibacillus scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.