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Cluster: CGMR013232_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_32363 k141_32363_6 3737 4963 - GH179
TC k141_32363 k141_32363_7 4978 6612 - 3.A.1.5.27
TC k141_32363 k141_32363_8 6652 7602 - 3.A.1.5.15
TC k141_32363 k141_32363_9 7589 8614 - 3.A.1.5.35
TC k141_32363 k141_32363_10 8628 9530 - 3.A.1.5.11
TC k141_32363 k141_32363_11 9546 10511 - 3.A.1.5.20
pfam k141_32363 k141_32363_12 10702 12162 - AP_endonuc_2 | CGDB
TF k141_32363 k141_32363_13 12628 13440 + HTH_6
CAZyme k141_32363 k141_32363_14 13541 15973 - GH39
Gene ID: k141_32363_6
Type: CAZyme
Location: 3737 - 4963 (-)
Gene ID: k141_32363_7
Type: TC
Location: 4978 - 6612 (-)
Gene ID: k141_32363_8
Type: TC
Location: 6652 - 7602 (-)
Gene ID: k141_32363_9
Type: TC
Location: 7589 - 8614 (-)
Gene ID: k141_32363_10
Type: TC
Location: 8628 - 9530 (-)
Gene ID: k141_32363_11
Type: TC
Location: 9546 - 10511 (-)
Gene ID: k141_32363_12
Type: pfam
Location: 10702 - 12162 (-)
Gene ID: k141_32363_13
Type: TF
Location: 12628 - 13440 (+)
Gene ID: k141_32363_14
Type: CAZyme
Location: 13541 - 15973 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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