Cluster: CGMR013232_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR013232
- CGC Family ID: CGCFAM_05406
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_337331 | k141_337331_2 | 1817 | 3043 | - | 2.A.1.46.7 |
| pfam | k141_337331 | k141_337331_3 | 3248 | 5116 | - | Peptidase_S9 |
| CAZyme | k141_337331 | k141_337331_4 | 5337 | 7820 | + | GH39 |
| TF | k141_337331 | k141_337331_5 | 7888 | 8559 | + | Trans_reg_C |
| TC | k141_337331 | k141_337331_6 | 8653 | 9576 | + | 3.A.1.131.1 |
Gene ID: k141_337331_2
Type: TC
Location: 1817 - 3043 (-)
Type: TC
Location: 1817 - 3043 (-)
Gene ID: k141_337331_3
Type: pfam
Location: 3248 - 5116 (-)
Type: pfam
Location: 3248 - 5116 (-)
Gene ID: k141_337331_4
Type: CAZyme
Location: 5337 - 7820 (+)
Type: CAZyme
Location: 5337 - 7820 (+)
Gene ID: k141_337331_5
Type: TF
Location: 7888 - 8559 (+)
Type: TF
Location: 7888 - 8559 (+)
Gene ID: k141_337331_6
Type: TC
Location: 8653 - 9576 (+)
Type: TC
Location: 8653 - 9576 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Catenibacillus
Species
Catenibacillus scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.