Cluster: CGMR013232_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR013232
- CGC Family ID: CGCFAM_00026
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_3233 | k141_3233_1 | 3 | 2399 | - | GH39 |
| CAZyme | k141_3233 | k141_3233_2 | 2414 | 4858 | - | GH39 |
| STP | k141_3233 | k141_3233_3 | 5105 | 6784 | + | SBP_bac_1 |
| TC | k141_3233 | k141_3233_4 | 7292 | 8647 | + | 3.A.1.1.10 |
| TC | k141_3233 | k141_3233_5 | 8668 | 9564 | + | 3.A.1.1.29 |
Gene ID: k141_3233_1
Type: CAZyme
Location: 3 - 2399 (-)
Type: CAZyme
Location: 3 - 2399 (-)
Gene ID: k141_3233_2
Type: CAZyme
Location: 2414 - 4858 (-)
Type: CAZyme
Location: 2414 - 4858 (-)
Gene ID: k141_3233_3
Type: STP
Location: 5105 - 6784 (+)
Type: STP
Location: 5105 - 6784 (+)
Gene ID: k141_3233_4
Type: TC
Location: 7292 - 8647 (+)
Type: TC
Location: 7292 - 8647 (+)
Gene ID: k141_3233_5
Type: TC
Location: 8668 - 9564 (+)
Type: TC
Location: 8668 - 9564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Catenibacillus
Species
Catenibacillus scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.