Cluster: CGMR013232_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR013232
- CGC Family ID: CGCFAM_08263
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_46609 | k141_46609_2 | 726 | 1652 | + | 3.A.1.1.11 |
| TC | k141_46609 | k141_46609_3 | 1665 | 2534 | + | 3.A.1.1.11 |
| TF | k141_46609 | k141_46609_4 | 2822 | 3742 | + | MarR |
| CAZyme | k141_46609 | k141_46609_5 | 3753 | 5216 | + | GH43_4 |
| CAZyme | k141_46609 | k141_46609_6 | 5248 | 6750 | + | GH51_1 |
| pfam | k141_46609 | k141_46609_7 | 6941 | 7225 | + | DUF6171 |
| CAZyme | k141_46609 | k141_46609_8 | 7222 | 9051 | + | GH146 |
Gene ID: k141_46609_2
Type: TC
Location: 726 - 1652 (+)
Type: TC
Location: 726 - 1652 (+)
Gene ID: k141_46609_3
Type: TC
Location: 1665 - 2534 (+)
Type: TC
Location: 1665 - 2534 (+)
Gene ID: k141_46609_4
Type: TF
Location: 2822 - 3742 (+)
Type: TF
Location: 2822 - 3742 (+)
Gene ID: k141_46609_5
Type: CAZyme
Location: 3753 - 5216 (+)
Type: CAZyme
Location: 3753 - 5216 (+)
Gene ID: k141_46609_6
Type: CAZyme
Location: 5248 - 6750 (+)
Type: CAZyme
Location: 5248 - 6750 (+)
Gene ID: k141_46609_7
Type: pfam
Location: 6941 - 7225 (+)
Type: pfam
Location: 6941 - 7225 (+)
Gene ID: k141_46609_8
Type: CAZyme
Location: 7222 - 9051 (+)
Type: CAZyme
Location: 7222 - 9051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Catenibacillus
Species
Catenibacillus scindens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.