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Cluster: CGMR012207_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6608 k141_6608_14 10047 11666 - 3.A.15.4.1
TC k141_6608 k141_6608_15 11666 12721 - 3.A.15.2.1
CAZyme k141_6608 k141_6608_16 12833 13297 - GH23
TC k141_6608 k141_6608_17 13300 13719 - 3.A.15.3.1
CAZyme k141_6608 k141_6608_18 14036 15865 + GH18
TF k141_6608 k141_6608_19 16231 16950 + GntR
TC k141_6608 k141_6608_20 16947 17960 + 3.A.1.5.20
TC k141_6608 k141_6608_21 17957 19039 + 3.A.1.5.20
TC k141_6608 k141_6608_22 19042 20556 + 3.A.1.5.20
TC k141_6608 k141_6608_23 20575 21516 + 3.A.1.5.11
TC k141_6608 k141_6608_24 21519 22394 + 3.A.1.5.11
Gene ID: k141_6608_14
Type: TC
Location: 10047 - 11666 (-)
Gene ID: k141_6608_15
Type: TC
Location: 11666 - 12721 (-)
Gene ID: k141_6608_16
Type: CAZyme
Location: 12833 - 13297 (-)
Gene ID: k141_6608_17
Type: TC
Location: 13300 - 13719 (-)
Gene ID: k141_6608_18
Type: CAZyme
Location: 14036 - 15865 (+)
Gene ID: k141_6608_19
Type: TF
Location: 16231 - 16950 (+)
Gene ID: k141_6608_20
Type: TC
Location: 16947 - 17960 (+)
Gene ID: k141_6608_21
Type: TC
Location: 17957 - 19039 (+)
Gene ID: k141_6608_22
Type: TC
Location: 19042 - 20556 (+)
Gene ID: k141_6608_23
Type: TC
Location: 20575 - 21516 (+)
Gene ID: k141_6608_24
Type: TC
Location: 21519 - 22394 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6608_23 vegetarian > omnivore 1.53684 0.03142
k141_6608_24 vegetarian > omnivore 2.02012 0.03142

🧭 Explore Read Mapping of CGC

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