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Cluster: CGMR012207_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_3958 k141_3958_63 72703 74154 + AA10 | CBM73
CAZyme k141_3958 k141_3958_64 74238 76622 - GH20
TC k141_3958 k141_3958_65 76801 79509 - 3.A.3.4.1
TF k141_3958 k141_3958_66 79900 80847 + LacI
TC k141_3958 k141_3958_67 80975 82393 + 4.A.1.2.4
CAZyme k141_3958 k141_3958_68 82445 84100 + GH13_29
pfam k141_3958 k141_3958_69 84236 84982 + KdgM
TF k141_3958 k141_3958_70 84991 85650 - HTH_6
TC k141_3958 k141_3958_71 85824 87227 + 4.A.2.1.11
CAZyme k141_3958 k141_3958_72 87238 89835 + GH38
TC k141_3958 k141_3958_73 89837 90409 + 4.A.2.1.3
Gene ID: k141_3958_63
Type: CAZyme
Location: 72703 - 74154 (+)
Gene ID: k141_3958_64
Type: CAZyme
Location: 74238 - 76622 (-)
Gene ID: k141_3958_65
Type: TC
Location: 76801 - 79509 (-)
Gene ID: k141_3958_66
Type: TF
Location: 79900 - 80847 (+)
Gene ID: k141_3958_67
Type: TC
Location: 80975 - 82393 (+)
Gene ID: k141_3958_68
Type: CAZyme
Location: 82445 - 84100 (+)
Gene ID: k141_3958_69
Type: pfam
Location: 84236 - 84982 (+)
Gene ID: k141_3958_70
Type: TF
Location: 84991 - 85650 (-)
Gene ID: k141_3958_71
Type: TC
Location: 85824 - 87227 (+)
Gene ID: k141_3958_72
Type: CAZyme
Location: 87238 - 89835 (+)
Gene ID: k141_3958_73
Type: TC
Location: 89837 - 90409 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_3958_64 vegetarian > omnivore 1.15693 0.03142
k141_3958_65 vegetarian > omnivore 1.01012 0.02164
k141_3958_68 vegan > omnivore 1.22315 0.00566

🧭 Explore Read Mapping of CGC

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