dbCAN Logo

Cluster: CGMR012207_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6725 k141_6725_172 167721 170738 + 1.B.12.5.2
TF k141_6725 k141_6725_173 170800 171378 - GerE
TC k141_6725 k141_6725_174 172001 174439 + 1.B.55.1.1
CAZyme k141_6725 k141_6725_175 174448 176385 + CE4 | GH153 | GH153
CAZyme k141_6725 k141_6725_176 176378 177709 + GT2
pfam k141_6725 k141_6725_177 177706 178140 + PgaD
peptidase k141_6725 k141_6725_178 178195 180057 - C51.A01
TC k141_6725 k141_6725_179 180174 181145 - 3.A.1.5.20
TC k141_6725 k141_6725_180 181142 182116 - 3.A.1.5.2
TC k141_6725 k141_6725_181 182109 182954 - 3.A.1.5.20
TC k141_6725 k141_6725_182 182959 183912 - 3.A.1.5.20
TC k141_6725 k141_6725_183 183957 185546 - 3.A.1.5.20
pfam k141_6725 k141_6725_184 185792 186658 + GST_C | GST_N | GST_N_2 | GST_C_2 | GST_C_3
pfam k141_6725 k141_6725_185 186817 187149 + Gly-zipper_YMGG | Gly-zipper_Omp
TC k141_6725 k141_6725_186 187199 188746 - 1.B.52.2.1
TC k141_6725 k141_6725_187 188966 190006 + 8.A.5.1.3
Gene ID: k141_6725_172
Type: TC
Location: 167721 - 170738 (+)
Gene ID: k141_6725_173
Type: TF
Location: 170800 - 171378 (-)
Gene ID: k141_6725_174
Type: TC
Location: 172001 - 174439 (+)
Gene ID: k141_6725_175
Type: CAZyme
Location: 174448 - 176385 (+)
Gene ID: k141_6725_176
Type: CAZyme
Location: 176378 - 177709 (+)
Gene ID: k141_6725_177
Type: pfam
Location: 177706 - 178140 (+)
Gene ID: k141_6725_178
Type: peptidase
Location: 178195 - 180057 (-)
Gene ID: k141_6725_179
Type: TC
Location: 180174 - 181145 (-)
Gene ID: k141_6725_180
Type: TC
Location: 181142 - 182116 (-)
Gene ID: k141_6725_181
Type: TC
Location: 182109 - 182954 (-)
Gene ID: k141_6725_182
Type: TC
Location: 182959 - 183912 (-)
Gene ID: k141_6725_183
Type: TC
Location: 183957 - 185546 (-)
Gene ID: k141_6725_184
Type: pfam
Location: 185792 - 186658 (+)
Gene ID: k141_6725_185
Type: pfam
Location: 186817 - 187149 (+)
Gene ID: k141_6725_186
Type: TC
Location: 187199 - 188746 (-)
Gene ID: k141_6725_187
Type: TC
Location: 188966 - 190006 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6725_174 vegetarian > omnivore 1.50556 0.03142
k141_6725_175 vegetarian > omnivore 1.70318 0.03142
k141_6725_175 vegetarian > vegan 1.26316 0.04504
k141_6725_176 vegetarian > omnivore 2.21215 0.03142
k141_6725_176 vegetarian > vegan 1.50845 0.04504
k141_6725_177 vegetarian > omnivore 1.19006 0.03142

🧭 Explore Read Mapping of CGC

← Back to Cluster List