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Cluster: CGMR012207_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_6725 k141_6725_1 3 674 + GH73
NULL(UNKNOWN) k141_6725 k141_6725_2 649 1293 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_6725 k141_6725_3 1307 1561 + DUF4087
TC k141_6725 k141_6725_4 2037 2603 + 2.A.96.1.1
TC k141_6725 k141_6725_5 2580 3902 - 3.A.7.9.1
pfam k141_6725 k141_6725_6 4025 4612 - MoCF_biosynth
pfam k141_6725 k141_6725_7 4723 5676 - TAL_FSA
TC k141_6725 k141_6725_8 5939 7369 + 2.A.25.1.10
Gene ID: k141_6725_1
Type: CAZyme
Location: 3 - 674 (+)
Gene ID: k141_6725_2
Type:
Location: 649 - 1293 (+)
Gene ID: k141_6725_3
Type: pfam
Location: 1307 - 1561 (+)
Gene ID: k141_6725_4
Type: TC
Location: 2037 - 2603 (+)
Gene ID: k141_6725_5
Type: TC
Location: 2580 - 3902 (-)
Gene ID: k141_6725_6
Type: pfam
Location: 4025 - 4612 (-)
Gene ID: k141_6725_7
Type: pfam
Location: 4723 - 5676 (-)
Gene ID: k141_6725_8
Type: TC
Location: 5939 - 7369 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6725_5 vegetarian > vegan 1.28469 0.04504

🧭 Explore Read Mapping of CGC

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