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Cluster: CGMR012207_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_4183 k141_4183_72 81675 82724 - 2.A.86.1.2
TC k141_4183 k141_4183_73 82870 84087 + 2.A.1.46.7
pfam k141_4183 k141_4183_74 84092 84649 - DcrB
TC k141_4183 k141_4183_75 84722 85387 - 2.A.88.8.6
pfam k141_4183 k141_4183_76 85555 85797 + TusA
TC k141_4183 k141_4183_77 85862 86455 - 2.A.95.1.5
pfam k141_4183 k141_4183_78 86633 87736 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme k141_4183 k141_4183_79 87976 90162 + CBM48 | GH13_9
CAZyme k141_4183 k141_4183_80 90159 92132 + CBM48 | GH13_11
pfam k141_4183 k141_4183_81 92150 93445 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme k141_4183 k141_4183_82 93445 94878 + GT5
CAZyme k141_4183 k141_4183_83 94897 97344 + GT35
pfam k141_4183 k141_4183_84 97387 98895 - DAO | DAO_C
STP k141_4183 k141_4183_85 99084 99416 + Rhodanese
TC k141_4183 k141_4183_86 99464 100294 + 9.B.104.1.1
TF k141_4183 k141_4183_87 100311 101069 + HTH_DeoR
TF k141_4183 k141_4183_88 101131 103836 - GerE
CAZyme k141_4183 k141_4183_89 104422 106815 + GT35
CAZyme k141_4183 k141_4183_90 106825 108906 + GH77
TC k141_4183 k141_4183_91 108966 110282 - 2.A.8.1.4
Gene ID: k141_4183_72
Type: TC
Location: 81675 - 82724 (-)
Gene ID: k141_4183_73
Type: TC
Location: 82870 - 84087 (+)
Gene ID: k141_4183_74
Type: pfam
Location: 84092 - 84649 (-)
Gene ID: k141_4183_75
Type: TC
Location: 84722 - 85387 (-)
Gene ID: k141_4183_76
Type: pfam
Location: 85555 - 85797 (+)
Gene ID: k141_4183_77
Type: TC
Location: 85862 - 86455 (-)
Gene ID: k141_4183_78
Type: pfam
Location: 86633 - 87736 (+)
Gene ID: k141_4183_79
Type: CAZyme
Location: 87976 - 90162 (+)
Gene ID: k141_4183_80
Type: CAZyme
Location: 90159 - 92132 (+)
Gene ID: k141_4183_81
Type: pfam
Location: 92150 - 93445 (+)
Gene ID: k141_4183_82
Type: CAZyme
Location: 93445 - 94878 (+)
Gene ID: k141_4183_83
Type: CAZyme
Location: 94897 - 97344 (+)
Gene ID: k141_4183_84
Type: pfam
Location: 97387 - 98895 (-)
Gene ID: k141_4183_85
Type: STP
Location: 99084 - 99416 (+)
Gene ID: k141_4183_86
Type: TC
Location: 99464 - 100294 (+)
Gene ID: k141_4183_87
Type: TF
Location: 100311 - 101069 (+)
Gene ID: k141_4183_88
Type: TF
Location: 101131 - 103836 (-)
Gene ID: k141_4183_89
Type: CAZyme
Location: 104422 - 106815 (+)
Gene ID: k141_4183_90
Type: CAZyme
Location: 106825 - 108906 (+)
Gene ID: k141_4183_91
Type: TC
Location: 108966 - 110282 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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