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Cluster: CGMR012207_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_9254 k141_9254_153 164274 166061 + GH13_10
CAZyme k141_9254 k141_9254_154 166058 168526 + GH13_26
CAZyme k141_9254 k141_9254_155 168542 170617 + CBM48 | GH13_11
TF k141_9254 k141_9254_156 170619 171164 - 0042156
pfam k141_9254 k141_9254_157 171364 172086 + DUF969
TC k141_9254 k141_9254_158 172083 173069 + 9.B.211.1.1
Gene ID: k141_9254_153
Type: CAZyme
Location: 164274 - 166061 (+)
Gene ID: k141_9254_154
Type: CAZyme
Location: 166058 - 168526 (+)
Gene ID: k141_9254_155
Type: CAZyme
Location: 168542 - 170617 (+)
Gene ID: k141_9254_156
Type: TF
Location: 170619 - 171164 (-)
Gene ID: k141_9254_157
Type: pfam
Location: 171364 - 172086 (+)
Gene ID: k141_9254_158
Type: TC
Location: 172083 - 173069 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_9254_153 vegetarian > omnivore 1.70258 0.03142
k141_9254_154 vegetarian > omnivore 1.14888 0.03142
k141_9254_155 vegetarian > omnivore 2.44956 0.03142
k141_9254_155 vegetarian > vegan 1.85352 0.04504
k141_9254_158 vegetarian > omnivore 2.09564 0.03142

🧭 Explore Read Mapping of CGC

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