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Cluster: CGMR012207_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_31 k141_31_64 62776 63690 - 1.B.21.1.1
TC k141_31 k141_31_65 63758 64840 - 3.A.1.1.46
pfam k141_31 k141_31_66 64854 65519 - Hydrolase | HAD_2
CAZyme k141_31 k141_31_67 65509 67788 - GH65
CAZyme k141_31 k141_31_68 67782 68837 - GH179
pfam k141_31 k141_31_69 68852 69640 - AP_endonuc_2
pfam k141_31 k141_31_70 69658 70710 - ADH_zinc_N
TC k141_31 k141_31_71 70740 71582 - 3.A.1.1.46
TC k141_31 k141_31_72 71569 72450 - 3.A.1.1.46
TC k141_31 k141_31_73 72473 73765 - 3.A.1.1.46
CAZyme k141_31 k141_31_74 73778 75475 - GH13_18
Gene ID: k141_31_64
Type: TC
Location: 62776 - 63690 (-)
Gene ID: k141_31_65
Type: TC
Location: 63758 - 64840 (-)
Gene ID: k141_31_66
Type: pfam
Location: 64854 - 65519 (-)
Gene ID: k141_31_67
Type: CAZyme
Location: 65509 - 67788 (-)
Gene ID: k141_31_68
Type: CAZyme
Location: 67782 - 68837 (-)
Gene ID: k141_31_69
Type: pfam
Location: 68852 - 69640 (-)
Gene ID: k141_31_70
Type: pfam
Location: 69658 - 70710 (-)
Gene ID: k141_31_71
Type: TC
Location: 70740 - 71582 (-)
Gene ID: k141_31_72
Type: TC
Location: 71569 - 72450 (-)
Gene ID: k141_31_73
Type: TC
Location: 72473 - 73765 (-)
Gene ID: k141_31_74
Type: CAZyme
Location: 73778 - 75475 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_31_70 vegetarian > omnivore 1.41629 0.03142

🧭 Explore Read Mapping of CGC

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