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Cluster: CGMR012207_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6388 k141_6388_44 46117 46917 + 3.A.1.13.1
TC k141_6388 k141_6388_45 46939 47562 + 1.A.62.2.2
pfam k141_6388 k141_6388_46 47621 47965 - Fe-S_biosyn
TC k141_6388 k141_6388_47 48045 49445 - 2.A.49.5.5
pfam k141_6388 k141_6388_48 49623 50903 + Aminotran_3
TC k141_6388 k141_6388_49 50988 52970 - 3.A.1.14.3
TC k141_6388 k141_6388_50 52967 53857 - 3.A.1.14.3
TC k141_6388 k141_6388_51 53857 54654 - 3.A.1.14.3
TC k141_6388 k141_6388_52 54705 56960 - 1.B.14.1.2
pfam k141_6388 k141_6388_53 57162 58166 - Fimbrial | MrkDrd
TC k141_6388 k141_6388_54 58175 60718 - 1.B.11.3.6
pfam k141_6388 k141_6388_55 60675 61388 - PapD_N | PapD_C
pfam k141_6388 k141_6388_56 61432 62004 - Fimbrial
CAZyme k141_6388 k141_6388_57 62338 64863 - GT51
Gene ID: k141_6388_44
Type: TC
Location: 46117 - 46917 (+)
Gene ID: k141_6388_45
Type: TC
Location: 46939 - 47562 (+)
Gene ID: k141_6388_46
Type: pfam
Location: 47621 - 47965 (-)
Gene ID: k141_6388_47
Type: TC
Location: 48045 - 49445 (-)
Gene ID: k141_6388_48
Type: pfam
Location: 49623 - 50903 (+)
Gene ID: k141_6388_49
Type: TC
Location: 50988 - 52970 (-)
Gene ID: k141_6388_50
Type: TC
Location: 52967 - 53857 (-)
Gene ID: k141_6388_51
Type: TC
Location: 53857 - 54654 (-)
Gene ID: k141_6388_52
Type: TC
Location: 54705 - 56960 (-)
Gene ID: k141_6388_53
Type: pfam
Location: 57162 - 58166 (-)
Gene ID: k141_6388_54
Type: TC
Location: 58175 - 60718 (-)
Gene ID: k141_6388_55
Type: pfam
Location: 60675 - 61388 (-)
Gene ID: k141_6388_56
Type: pfam
Location: 61432 - 62004 (-)
Gene ID: k141_6388_57
Type: CAZyme
Location: 62338 - 64863 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6388_45 vegetarian > omnivore 1.08855 0.03142
k141_6388_47 vegetarian > vegan 2.10928 0.01460

🧭 Explore Read Mapping of CGC

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