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Cluster: CGMR012207_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_3813 k141_3813_1 2 1072 + 2.A.1.14.2
CAZyme k141_3813 k141_3813_2 1090 3453 + GH31_2
TC k141_3813 k141_3813_3 3641 5236 - 3.A.1.121.4
peptidase k141_3813 k141_3813_4 5459 6379 + C82.UPB
TF k141_3813 k141_3813_5 6421 7137 - GntR
TC k141_3813 k141_3813_6 7153 8475 - 4.A.3.2.9
CAZyme k141_3813 k141_3813_7 8527 9903 - GH1
pfam k141_3813 k141_3813_8 10202 11305 + AstE_AspA_cat
TC k141_3813 k141_3813_9 11404 12444 - 8.A.5.1.6
TC k141_3813 k141_3813_10 12549 14072 - 1.B.17.3.8
TC k141_3813 k141_3813_11 14072 15643 - 2.A.1.3.2
TC k141_3813 k141_3813_12 15640 16734 - 8.A.1.1.2
TC k141_3813 k141_3813_13 16836 17945 - 2.A.45.2.5
Gene ID: k141_3813_1
Type: TC
Location: 2 - 1072 (+)
Gene ID: k141_3813_2
Type: CAZyme
Location: 1090 - 3453 (+)
Gene ID: k141_3813_3
Type: TC
Location: 3641 - 5236 (-)
Gene ID: k141_3813_4
Type: peptidase
Location: 5459 - 6379 (+)
Gene ID: k141_3813_5
Type: TF
Location: 6421 - 7137 (-)
Gene ID: k141_3813_6
Type: TC
Location: 7153 - 8475 (-)
Gene ID: k141_3813_7
Type: CAZyme
Location: 8527 - 9903 (-)
Gene ID: k141_3813_8
Type: pfam
Location: 10202 - 11305 (+)
Gene ID: k141_3813_9
Type: TC
Location: 11404 - 12444 (-)
Gene ID: k141_3813_10
Type: TC
Location: 12549 - 14072 (-)
Gene ID: k141_3813_11
Type: TC
Location: 14072 - 15643 (-)
Gene ID: k141_3813_12
Type: TC
Location: 15640 - 16734 (-)
Gene ID: k141_3813_13
Type: TC
Location: 16836 - 17945 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_3813_1 vegetarian > omnivore 1.09114 0.03142
k141_3813_2 vegan > omnivore 1.45812 0.00566
k141_3813_6 vegetarian > omnivore 1.48594 0.03078
k141_3813_6 vegetarian > vegan 1.30599 0.04504
k141_3813_9 vegan > omnivore 1.61088 0.03198
k141_3813_9 vegetarian > omnivore 2.35260 0.03078
k141_3813_10 vegetarian > omnivore 1.29654 0.03142
k141_3813_11 vegetarian > omnivore 1.16616 0.03142

🧭 Explore Read Mapping of CGC

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