Cluster: CGMR012207_CGC24
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR012207
- CGC Family ID: CGCFAM_00261
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2594 | k141_2594_132 | 133208 | 134941 | - | 2.A.36.6.11 |
| peptidase | k141_2594 | k141_2594_133 | 135030 | 135944 | - | S66.UPW |
| CAZyme | k141_2594 | k141_2594_134 | 136051 | 136662 | + | GH23 |
| pfam | k141_2594 | k141_2594_135 | 136699 | 137430 | - | PilZ | PilZN |
| TC | k141_2594 | k141_2594_136 | 137638 | 137892 | + | 1.E.43.1.1 |
| TC | k141_2594 | k141_2594_137 | 138005 | 140107 | + | 1.B.14.1.2 |
| CAZyme | k141_2594 | k141_2594_138 | 140168 | 141853 | - | GH37 |
| TC | k141_2594 | k141_2594_139 | 142135 | 142392 | + | 1.B.15.1.1 |
| TC | k141_2594 | k141_2594_140 | 142559 | 142672 | + | 1.B.15.1.1 |
| TF | k141_2594 | k141_2594_141 | 142827 | 143783 | - | HTH_AraC | HTH_AraC |
| TC | k141_2594 | k141_2594_142 | 143899 | 145086 | + | 2.A.1.2.26 |
Gene ID: k141_2594_132
Type: TC
Location: 133208 - 134941 (-)
Type: TC
Location: 133208 - 134941 (-)
Gene ID: k141_2594_133
Type: peptidase
Location: 135030 - 135944 (-)
Type: peptidase
Location: 135030 - 135944 (-)
Gene ID: k141_2594_134
Type: CAZyme
Location: 136051 - 136662 (+)
Type: CAZyme
Location: 136051 - 136662 (+)
Gene ID: k141_2594_135
Type: pfam
Location: 136699 - 137430 (-)
Type: pfam
Location: 136699 - 137430 (-)
Gene ID: k141_2594_136
Type: TC
Location: 137638 - 137892 (+)
Type: TC
Location: 137638 - 137892 (+)
Gene ID: k141_2594_137
Type: TC
Location: 138005 - 140107 (+)
Type: TC
Location: 138005 - 140107 (+)
Gene ID: k141_2594_138
Type: CAZyme
Location: 140168 - 141853 (-)
Type: CAZyme
Location: 140168 - 141853 (-)
Gene ID: k141_2594_139
Type: TC
Location: 142135 - 142392 (+)
Type: TC
Location: 142135 - 142392 (+)
Gene ID: k141_2594_140
Type: TC
Location: 142559 - 142672 (+)
Type: TC
Location: 142559 - 142672 (+)
Gene ID: k141_2594_141
Type: TF
Location: 142827 - 143783 (-)
Type: TF
Location: 142827 - 143783 (-)
Gene ID: k141_2594_142
Type: TC
Location: 143899 - 145086 (+)
Type: TC
Location: 143899 - 145086 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter bugandensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_2594_133 | vegetarian > omnivore | 1.45108 | 0.03142 |
| k141_2594_133 | vegetarian > vegan | 1.92638 | 0.04504 |
| k141_2594_134 | vegetarian > vegan | 1.20764 | 0.04504 |
| k141_2594_135 | vegetarian > omnivore | 1.57287 | 0.03142 |
| k141_2594_135 | vegetarian > vegan | 1.82529 | 0.04504 |