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Cluster: CGMR012207_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2594 k141_2594_20 15788 17131 - 2.A.13.1.2
pfam k141_2594 k141_2594_21 17295 17798 - Ferritin
TC k141_2594 k141_2594_22 18586 19575 + 3.A.1.2.2
TC k141_2594 k141_2594_23 19647 21161 + 3.A.1.2.2
TC k141_2594 k141_2594_24 21176 22156 + 3.A.1.2.2
pfam k141_2594 k141_2594_25 22333 23136 + Trehalose_PPase
CAZyme k141_2594 k141_2594_26 23111 24535 + GT20
Gene ID: k141_2594_20
Type: TC
Location: 15788 - 17131 (-)
Gene ID: k141_2594_21
Type: pfam
Location: 17295 - 17798 (-)
Gene ID: k141_2594_22
Type: TC
Location: 18586 - 19575 (+)
Gene ID: k141_2594_23
Type: TC
Location: 19647 - 21161 (+)
Gene ID: k141_2594_24
Type: TC
Location: 21176 - 22156 (+)
Gene ID: k141_2594_25
Type: pfam
Location: 22333 - 23136 (+)
Gene ID: k141_2594_26
Type: CAZyme
Location: 23111 - 24535 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2594_25 vegetarian > omnivore 1.03563 0.03142

🧭 Explore Read Mapping of CGC

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