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Cluster: CGMR012207_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6490 k141_6490_32 30934 31956 - 2.A.52.1.1
pfam k141_6490 k141_6490_33 31958 34174 - Acylphosphatase | Sua5_yciO_yrdC | zf-HYPF | zf-HYPF | HypF_C | HypF_C_2
TC k141_6490 k141_6490_34 34181 34726 - 5.A.3.11.1
TF k141_6490 k141_6490_35 34860 35873 - LacI
TC k141_6490 k141_6490_36 36087 37538 + 4.A.1.2.3
CAZyme k141_6490 k141_6490_37 37557 38981 + GH1
peptidase k141_6490 k141_6490_38 39061 39516 - A31.003
pfam k141_6490 k141_6490_39 39509 39919 - HycH
TC k141_6490 k141_6490_40 39916 40683 - 3.D.1.9.2
TC k141_6490 k141_6490_41 40683 41225 - 3.D.1.9.2
TC k141_6490 k141_6490_42 41235 42944 - 3.D.1.9.2
TC k141_6490 k141_6490_43 42960 43883 - 3.D.1.9.2
TC k141_6490 k141_6490_44 43885 45699 - 3.D.1.9.2
TC k141_6490 k141_6490_45 45696 46304 - 3.D.1.9.2
Gene ID: k141_6490_32
Type: TC
Location: 30934 - 31956 (-)
Gene ID: k141_6490_33
Type: pfam
Location: 31958 - 34174 (-)
Gene ID: k141_6490_34
Type: TC
Location: 34181 - 34726 (-)
Gene ID: k141_6490_35
Type: TF
Location: 34860 - 35873 (-)
Gene ID: k141_6490_36
Type: TC
Location: 36087 - 37538 (+)
Gene ID: k141_6490_37
Type: CAZyme
Location: 37557 - 38981 (+)
Gene ID: k141_6490_38
Type: peptidase
Location: 39061 - 39516 (-)
Gene ID: k141_6490_39
Type: pfam
Location: 39509 - 39919 (-)
Gene ID: k141_6490_40
Type: TC
Location: 39916 - 40683 (-)
Gene ID: k141_6490_41
Type: TC
Location: 40683 - 41225 (-)
Gene ID: k141_6490_42
Type: TC
Location: 41235 - 42944 (-)
Gene ID: k141_6490_43
Type: TC
Location: 42960 - 43883 (-)
Gene ID: k141_6490_44
Type: TC
Location: 43885 - 45699 (-)
Gene ID: k141_6490_45
Type: TC
Location: 45696 - 46304 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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