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Cluster: CGMR012207_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6551 k141_6551_93 96939 98159 + 2.A.1.2.15
pfam k141_6551 k141_6551_94 98146 98559 + CMD
pfam k141_6551 k141_6551_95 98556 99731 + Thiolase_N | ketoacyl-synt | Thiolase_C
TC k141_6551 k141_6551_96 99794 100792 - 8.A.5.1.6
TC k141_6551 k141_6551_97 101000 102190 + 2.A.1.2.26
TC k141_6551 k141_6551_98 102239 103144 - 2.A.7.3.12
pfam k141_6551 k141_6551_99 103292 104671 - LamB
TC k141_6551 k141_6551_100 104810 105115 - 4.A.3.2.1
CAZyme k141_6551 k141_6551_101 105118 106494 - GH1
TC k141_6551 k141_6551_102 106512 107837 - 4.A.3.2.6
TC k141_6551 k141_6551_103 107849 108163 - 4.A.3.2.6
TF k141_6551 k141_6551_104 108415 109407 + LacI
NULL(UNKNOWN) k141_6551 k141_6551_105 109452 109748 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_6551 k141_6551_106 109870 111234 - 2.A.6.2.19
TC k141_6551 k141_6551_107 111234 114344 - 2.A.6.2.19
TC k141_6551 k141_6551_108 114344 115465 - 2.A.6.2.19
STP k141_6551 k141_6551_109 115614 116183 - TetR_N
pfam k141_6551 k141_6551_110 116370 116789 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TC k141_6551 k141_6551_111 116937 117737 + 3.A.1.24.1
Gene ID: k141_6551_93
Type: TC
Location: 96939 - 98159 (+)
Gene ID: k141_6551_94
Type: pfam
Location: 98146 - 98559 (+)
Gene ID: k141_6551_95
Type: pfam
Location: 98556 - 99731 (+)
Gene ID: k141_6551_96
Type: TC
Location: 99794 - 100792 (-)
Gene ID: k141_6551_97
Type: TC
Location: 101000 - 102190 (+)
Gene ID: k141_6551_98
Type: TC
Location: 102239 - 103144 (-)
Gene ID: k141_6551_99
Type: pfam
Location: 103292 - 104671 (-)
Gene ID: k141_6551_100
Type: TC
Location: 104810 - 105115 (-)
Gene ID: k141_6551_101
Type: CAZyme
Location: 105118 - 106494 (-)
Gene ID: k141_6551_102
Type: TC
Location: 106512 - 107837 (-)
Gene ID: k141_6551_103
Type: TC
Location: 107849 - 108163 (-)
Gene ID: k141_6551_104
Type: TF
Location: 108415 - 109407 (+)
Gene ID: k141_6551_105
Type:
Location: 109452 - 109748 (-)
Gene ID: k141_6551_106
Type: TC
Location: 109870 - 111234 (-)
Gene ID: k141_6551_107
Type: TC
Location: 111234 - 114344 (-)
Gene ID: k141_6551_108
Type: TC
Location: 114344 - 115465 (-)
Gene ID: k141_6551_109
Type: STP
Location: 115614 - 116183 (-)
Gene ID: k141_6551_110
Type: pfam
Location: 116370 - 116789 (+)
Gene ID: k141_6551_111
Type: TC
Location: 116937 - 117737 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_6551_99 vegetarian > omnivore 1.02769 0.03142
k141_6551_99 vegetarian > vegan 1.45505 0.04504
k141_6551_100 vegetarian > omnivore 2.22054 0.03078
k141_6551_101 vegetarian > vegan 1.28681 0.04504
k141_6551_102 vegetarian > omnivore 1.47759 0.03078
k141_6551_103 vegetarian > omnivore 1.65595 0.03078
k141_6551_103 vegetarian > vegan 1.06380 0.04504
k141_6551_104 vegetarian > omnivore 1.22302 0.03078
k141_6551_106 vegetarian > omnivore 1.30929 0.03142
k141_6551_106 vegetarian > vegan 1.28033 0.04504
k141_6551_108 vegetarian > omnivore 1.00505 0.03142
k141_6551_110 vegetarian > omnivore 1.48173 0.03142
k141_6551_111 vegetarian > omnivore 1.15043 0.03142

🧭 Explore Read Mapping of CGC

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