Cluster: CGMR012207_CGC10
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR012207
- CGC Family ID: CGCFAM_00236
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6608 | k141_6608_234 | 246535 | 248718 | + | 1.B.14.1.15 |
| pfam | k141_6608 | k141_6608_235 | 248847 | 250820 | + | PhoX |
| TC | k141_6608 | k141_6608_236 | 250923 | 252311 | + | 2.A.3.1.1 |
| TC | k141_6608 | k141_6608_237 | 252556 | 253791 | + | 2.A.1.10.4 |
| pfam | k141_6608 | k141_6608_238 | 253807 | 254832 | + | AP_endonuc_2 |
| CAZyme | k141_6608 | k141_6608_239 | 254801 | 255967 | + | GH109 |
| TF | k141_6608 | k141_6608_240 | 256043 | 257014 | + | LacI |
| TC | k141_6608 | k141_6608_241 | 257015 | 258259 | - | 1.A.23.4.5 |
| TC | k141_6608 | k141_6608_242 | 258325 | 259761 | - | 2.A.1.3.38 |
Gene ID: k141_6608_234
Type: TC
Location: 246535 - 248718 (+)
Type: TC
Location: 246535 - 248718 (+)
Gene ID: k141_6608_235
Type: pfam
Location: 248847 - 250820 (+)
Type: pfam
Location: 248847 - 250820 (+)
Gene ID: k141_6608_236
Type: TC
Location: 250923 - 252311 (+)
Type: TC
Location: 250923 - 252311 (+)
Gene ID: k141_6608_237
Type: TC
Location: 252556 - 253791 (+)
Type: TC
Location: 252556 - 253791 (+)
Gene ID: k141_6608_238
Type: pfam
Location: 253807 - 254832 (+)
Type: pfam
Location: 253807 - 254832 (+)
Gene ID: k141_6608_239
Type: CAZyme
Location: 254801 - 255967 (+)
Type: CAZyme
Location: 254801 - 255967 (+)
Gene ID: k141_6608_240
Type: TF
Location: 256043 - 257014 (+)
Type: TF
Location: 256043 - 257014 (+)
Gene ID: k141_6608_241
Type: TC
Location: 257015 - 258259 (-)
Type: TC
Location: 257015 - 258259 (-)
Gene ID: k141_6608_242
Type: TC
Location: 258325 - 259761 (-)
Type: TC
Location: 258325 - 259761 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter bugandensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_6608_234 | vegetarian > omnivore | 2.06023 | 0.03078 |
| k141_6608_235 | vegetarian > omnivore | 1.69067 | 0.03142 |
| k141_6608_235 | vegetarian > vegan | 1.75003 | 0.04504 |
| k141_6608_239 | vegetarian > omnivore | 1.09651 | 0.03142 |
| k141_6608_240 | vegetarian > omnivore | 1.39982 | 0.03142 |
| k141_6608_242 | vegetarian > omnivore | 2.75289 | 0.03078 |