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Cluster: CGMR012147_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_203703 k141_203703_61 57581 58849 - 2.A.1.6.2
TF k141_203703 k141_203703_62 58995 60542 + 0037176
TC k141_203703 k141_203703_63 60663 62057 + 2.A.3.1.20
TC k141_203703 k141_203703_64 62094 62936 - 2.A.115.1.1
pfam k141_203703 k141_203703_65 63048 64817 - tRNA-synt_2 | tRNA_anti-codon | GAD
pfam k141_203703 k141_203703_66 64814 66118 - tRNA-synt_2b | HGTP_anticodon | tRNA-synt_His
CAZyme k141_203703 k141_203703_67 66474 68150 - GH13_31
TC k141_203703 k141_203703_68 68152 69519 - 2.A.2.6.2
CAZyme k141_203703 k141_203703_69 69587 71257 - GH13_31
TF k141_203703 k141_203703_70 71374 72372 + LacI
pfam k141_203703 k141_203703_71 72416 73090 - Hydrolase | HAD_2
CAZyme k141_203703 k141_203703_72 73187 75448 - GH65
Gene ID: k141_203703_61
Type: TC
Location: 57581 - 58849 (-)
Gene ID: k141_203703_62
Type: TF
Location: 58995 - 60542 (+)
Gene ID: k141_203703_63
Type: TC
Location: 60663 - 62057 (+)
Gene ID: k141_203703_64
Type: TC
Location: 62094 - 62936 (-)
Gene ID: k141_203703_65
Type: pfam
Location: 63048 - 64817 (-)
Gene ID: k141_203703_66
Type: pfam
Location: 64814 - 66118 (-)
Gene ID: k141_203703_67
Type: CAZyme
Location: 66474 - 68150 (-)
Gene ID: k141_203703_68
Type: TC
Location: 68152 - 69519 (-)
Gene ID: k141_203703_69
Type: CAZyme
Location: 69587 - 71257 (-)
Gene ID: k141_203703_70
Type: TF
Location: 71374 - 72372 (+)
Gene ID: k141_203703_71
Type: pfam
Location: 72416 - 73090 (-)
Gene ID: k141_203703_72
Type: CAZyme
Location: 73187 - 75448 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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