Cluster: CGMR012147_CGC25
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR012147
- CGC Family ID: CGCFAM_08248
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_122052 | k141_122052_113 | 102076 | 102927 | - | GT8 |
| STP | k141_122052 | k141_122052_114 | 103029 | 104189 | + | AAA |
| TF | k141_122052 | k141_122052_115 | 104454 | 104756 | - | HTH_5 |
| TC | k141_122052 | k141_122052_116 | 104764 | 105375 | - | 2.A.77.1.1 |
| pfam | k141_122052 | k141_122052_117 | 105767 | 106228 | - | Usp |
| TC | k141_122052 | k141_122052_118 | 106253 | 107644 | - | 2.A.55.2.6 |
| TC | k141_122052 | k141_122052_119 | 108010 | 108915 | - | 2.A.4.1.3 |
| pfam | k141_122052 | k141_122052_120 | 108988 | 109704 | - | SIR2 |
| NULL(UNKNOWN) | k141_122052 | k141_122052_121 | 109704 | 110648 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_122052 | k141_122052_122 | 110645 | 111859 | - | 2.A.6.6.11 |
| pfam | k141_122052 | k141_122052_123 | 111852 | 112772 | - | Ppx-GppA |
| TC | k141_122052 | k141_122052_124 | 113038 | 114033 | - | 9.B.105.3.4 |
| pfam | k141_122052 | k141_122052_125 | 114155 | 115336 | - | LytR_cpsA_psr |
| pfam | k141_122052 | k141_122052_126 | 115422 | 116675 | - | FemAB |
| CAZyme | k141_122052 | k141_122052_127 | 116749 | 117798 | - | CBM50 | CBM50 |
| peptidase | k141_122052 | k141_122052_128 | 118009 | 118359 | - | C40.UNW |
| CAZyme | k141_122052 | k141_122052_129 | 118376 | 119536 | - | CBM50 | CBM50 |
Gene ID: k141_122052_113
Type: CAZyme
Location: 102076 - 102927 (-)
Type: CAZyme
Location: 102076 - 102927 (-)
Gene ID: k141_122052_114
Type: STP
Location: 103029 - 104189 (+)
Type: STP
Location: 103029 - 104189 (+)
Gene ID: k141_122052_115
Type: TF
Location: 104454 - 104756 (-)
Type: TF
Location: 104454 - 104756 (-)
Gene ID: k141_122052_116
Type: TC
Location: 104764 - 105375 (-)
Type: TC
Location: 104764 - 105375 (-)
Gene ID: k141_122052_117
Type: pfam
Location: 105767 - 106228 (-)
Type: pfam
Location: 105767 - 106228 (-)
Gene ID: k141_122052_118
Type: TC
Location: 106253 - 107644 (-)
Type: TC
Location: 106253 - 107644 (-)
Gene ID: k141_122052_119
Type: TC
Location: 108010 - 108915 (-)
Type: TC
Location: 108010 - 108915 (-)
Gene ID: k141_122052_120
Type: pfam
Location: 108988 - 109704 (-)
Type: pfam
Location: 108988 - 109704 (-)
Gene ID: k141_122052_121
Type:
Location: 109704 - 110648 (-)
Type:
Location: 109704 - 110648 (-)
Gene ID: k141_122052_122
Type: TC
Location: 110645 - 111859 (-)
Type: TC
Location: 110645 - 111859 (-)
Gene ID: k141_122052_123
Type: pfam
Location: 111852 - 112772 (-)
Type: pfam
Location: 111852 - 112772 (-)
Gene ID: k141_122052_124
Type: TC
Location: 113038 - 114033 (-)
Type: TC
Location: 113038 - 114033 (-)
Gene ID: k141_122052_125
Type: pfam
Location: 114155 - 115336 (-)
Type: pfam
Location: 114155 - 115336 (-)
Gene ID: k141_122052_126
Type: pfam
Location: 115422 - 116675 (-)
Type: pfam
Location: 115422 - 116675 (-)
Gene ID: k141_122052_127
Type: CAZyme
Location: 116749 - 117798 (-)
Type: CAZyme
Location: 116749 - 117798 (-)
Gene ID: k141_122052_128
Type: peptidase
Location: 118009 - 118359 (-)
Type: peptidase
Location: 118009 - 118359 (-)
Gene ID: k141_122052_129
Type: CAZyme
Location: 118376 - 119536 (-)
Type: CAZyme
Location: 118376 - 119536 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Leuconostoc
Species
Leuconostoc citreum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.