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Cluster: CGMR012147_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_39737 k141_39737_2 1348 2433 + 3.A.1.24.3
TC k141_39737 k141_39737_3 2430 3125 + 3.A.1.24.6
TF k141_39737 k141_39737_4 3154 3864 - GntR
CAZyme k141_39737 k141_39737_5 3864 5006 - CE9
pfam k141_39737 k141_39737_6 5166 5678 - PgpA
STP k141_39737 k141_39737_7 5983 7320 - Pyr_redox_2
TC k141_39737 k141_39737_8 7663 8244 + 3.A.1.30.2
TC k141_39737 k141_39737_9 8237 9646 + 3.A.1.30.1
NULL(UNKNOWN) k141_39737 k141_39737_10 9643 10305 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_39737 k141_39737_11 10317 10988 + TENA_THI-4
CAZyme k141_39737 k141_39737_12 11039 15526 - GH70
TC k141_39737 k141_39737_13 15724 17094 - 2.A.1.3.61
Gene ID: k141_39737_2
Type: TC
Location: 1348 - 2433 (+)
Gene ID: k141_39737_3
Type: TC
Location: 2430 - 3125 (+)
Gene ID: k141_39737_4
Type: TF
Location: 3154 - 3864 (-)
Gene ID: k141_39737_5
Type: CAZyme
Location: 3864 - 5006 (-)
Gene ID: k141_39737_6
Type: pfam
Location: 5166 - 5678 (-)
Gene ID: k141_39737_7
Type: STP
Location: 5983 - 7320 (-)
Gene ID: k141_39737_8
Type: TC
Location: 7663 - 8244 (+)
Gene ID: k141_39737_9
Type: TC
Location: 8237 - 9646 (+)
Gene ID: k141_39737_10
Type:
Location: 9643 - 10305 (+)
Gene ID: k141_39737_11
Type: pfam
Location: 10317 - 10988 (+)
Gene ID: k141_39737_12
Type: CAZyme
Location: 11039 - 15526 (-)
Gene ID: k141_39737_13
Type: TC
Location: 15724 - 17094 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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