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Cluster: CGMR012147_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_117529 k141_117529_27 25909 26802 + 3.A.1.144.3
pfam k141_117529 k141_117529_28 26795 28024 + ABC2_membrane_3
NULL(UNKNOWN) k141_117529 k141_117529_29 28041 28511 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_117529 k141_117529_30 28552 30258 - 3.A.1.12.5
TC k141_117529 k141_117529_31 30251 31444 - 3.A.1.12.5
TF k141_117529 k141_117529_32 31629 32252 + GntR
TC k141_117529 k141_117529_33 32344 32889 + 3.A.1.25.4
pfam k141_117529 k141_117529_34 33216 34064 - THF_DHG_CYH | THF_DHG_CYH_C
TC k141_117529 k141_117529_35 34138 34623 + 3.A.11.1.4
sulfatase k141_117529 k141_117529_36 34911 35870 + S1_63
pfam k141_117529 k141_117529_37 35907 36407 + Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_8 | Acetyltransf_10
CAZyme k141_117529 k141_117529_38 36439 37416 - GT2
pfam k141_117529 k141_117529_39 37510 38568 - Acyl_transf_3
NULL(UNKNOWN) k141_117529 k141_117529_40 38561 40288 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_117529 k141_117529_41 40285 43833 - GT2
TC k141_117529 k141_117529_42 43911 44726 - 3.A.1.104.1
TC k141_117529 k141_117529_43 44734 45831 - 3.A.1.104.1
Gene ID: k141_117529_27
Type: TC
Location: 25909 - 26802 (+)
Gene ID: k141_117529_28
Type: pfam
Location: 26795 - 28024 (+)
Gene ID: k141_117529_29
Type:
Location: 28041 - 28511 (+)
Gene ID: k141_117529_30
Type: TC
Location: 28552 - 30258 (-)
Gene ID: k141_117529_31
Type: TC
Location: 30251 - 31444 (-)
Gene ID: k141_117529_32
Type: TF
Location: 31629 - 32252 (+)
Gene ID: k141_117529_33
Type: TC
Location: 32344 - 32889 (+)
Gene ID: k141_117529_34
Type: pfam
Location: 33216 - 34064 (-)
Gene ID: k141_117529_35
Type: TC
Location: 34138 - 34623 (+)
Gene ID: k141_117529_36
Type: sulfatase
Location: 34911 - 35870 (+)
Gene ID: k141_117529_37
Type: pfam
Location: 35907 - 36407 (+)
Gene ID: k141_117529_38
Type: CAZyme
Location: 36439 - 37416 (-)
Gene ID: k141_117529_39
Type: pfam
Location: 37510 - 38568 (-)
Gene ID: k141_117529_40
Type:
Location: 38561 - 40288 (-)
Gene ID: k141_117529_41
Type: CAZyme
Location: 40285 - 43833 (-)
Gene ID: k141_117529_42
Type: TC
Location: 43911 - 44726 (-)
Gene ID: k141_117529_43
Type: TC
Location: 44734 - 45831 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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