Cluster: CGMR012147_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR012147
- CGC Family ID: CGCFAM_05395
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_116966 | k141_116966_4 | 1486 | 4032 | + | 2.A.1.3.35 |
| pfam | k141_116966 | k141_116966_5 | 4073 | 4747 | + | YfbR-like | HD_3 |
| STP | k141_116966 | k141_116966_6 | 4777 | 5274 | + | NUDIX |
| TC | k141_116966 | k141_116966_7 | 5313 | 7295 | + | 3.A.1.122.13 |
| TC | k141_116966 | k141_116966_8 | 7432 | 9150 | + | 3.A.1.135.8 |
| TC | k141_116966 | k141_116966_9 | 9152 | 10933 | + | 3.A.1.135.8 |
| CAZyme | k141_116966 | k141_116966_10 | 11077 | 12306 | + | GT4 |
| CAZyme | k141_116966 | k141_116966_11 | 12307 | 13314 | + | GT4 |
Gene ID: k141_116966_4
Type: TC
Location: 1486 - 4032 (+)
Type: TC
Location: 1486 - 4032 (+)
Gene ID: k141_116966_5
Type: pfam
Location: 4073 - 4747 (+)
Type: pfam
Location: 4073 - 4747 (+)
Gene ID: k141_116966_6
Type: STP
Location: 4777 - 5274 (+)
Type: STP
Location: 4777 - 5274 (+)
Gene ID: k141_116966_7
Type: TC
Location: 5313 - 7295 (+)
Type: TC
Location: 5313 - 7295 (+)
Gene ID: k141_116966_8
Type: TC
Location: 7432 - 9150 (+)
Type: TC
Location: 7432 - 9150 (+)
Gene ID: k141_116966_9
Type: TC
Location: 9152 - 10933 (+)
Type: TC
Location: 9152 - 10933 (+)
Gene ID: k141_116966_10
Type: CAZyme
Location: 11077 - 12306 (+)
Type: CAZyme
Location: 11077 - 12306 (+)
Gene ID: k141_116966_11
Type: CAZyme
Location: 12307 - 13314 (+)
Type: CAZyme
Location: 12307 - 13314 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Leuconostoc
Species
Leuconostoc citreum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.