Cluster: CGMR012055_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR012055
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_195795 | k141_195795_4 | 3920 | 6247 | - | 9.A.8.1.6 |
| TC | k141_195795 | k141_195795_5 | 6371 | 6592 | - | 9.A.8.1.6 |
| STP | k141_195795 | k141_195795_6 | 6632 | 6874 | - | FeoA |
| STP | k141_195795 | k141_195795_7 | 7064 | 7312 | - | PTS-HPr |
| TC | k141_195795 | k141_195795_8 | 7734 | 9197 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | k141_195795 | k141_195795_9 | 9351 | 9806 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_195795 | k141_195795_10 | 9810 | 12818 | - | GH2 |
Gene ID: k141_195795_4
Type: TC
Location: 3920 - 6247 (-)
Type: TC
Location: 3920 - 6247 (-)
Gene ID: k141_195795_5
Type: TC
Location: 6371 - 6592 (-)
Type: TC
Location: 6371 - 6592 (-)
Gene ID: k141_195795_6
Type: STP
Location: 6632 - 6874 (-)
Type: STP
Location: 6632 - 6874 (-)
Gene ID: k141_195795_7
Type: STP
Location: 7064 - 7312 (-)
Type: STP
Location: 7064 - 7312 (-)
Gene ID: k141_195795_8
Type: TC
Location: 7734 - 9197 (-)
Type: TC
Location: 7734 - 9197 (-)
Gene ID: k141_195795_9
Type:
Location: 9351 - 9806 (-)
Type:
Location: 9351 - 9806 (-)
Gene ID: k141_195795_10
Type: CAZyme
Location: 9810 - 12818 (-)
Type: CAZyme
Location: 9810 - 12818 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.