Cluster: CGMR012055_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR012055
- CGC Family ID: CGCFAM_00290
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_98529 | k141_98529_1 | 206 | 1564 | - | 2.A.33.1.1 |
| pfam | k141_98529 | k141_98529_2 | 1832 | 2755 | - | DHH | DHHA2 |
| pfam | k141_98529 | k141_98529_3 | 2883 | 3836 | - | ROK |
| TC | k141_98529 | k141_98529_4 | 4078 | 4410 | - | 4.A.3.2.3 |
| TC | k141_98529 | k141_98529_5 | 4420 | 4722 | - | 4.A.3.2.9 |
| TC | k141_98529 | k141_98529_6 | 4875 | 6227 | - | 4.A.3.2.9 |
| CAZyme | k141_98529 | k141_98529_7 | 6348 | 7748 | - | GH1 |
Gene ID: k141_98529_1
Type: TC
Location: 206 - 1564 (-)
Type: TC
Location: 206 - 1564 (-)
Gene ID: k141_98529_2
Type: pfam
Location: 1832 - 2755 (-)
Type: pfam
Location: 1832 - 2755 (-)
Gene ID: k141_98529_3
Type: pfam
Location: 2883 - 3836 (-)
Type: pfam
Location: 2883 - 3836 (-)
Gene ID: k141_98529_4
Type: TC
Location: 4078 - 4410 (-)
Type: TC
Location: 4078 - 4410 (-)
Gene ID: k141_98529_5
Type: TC
Location: 4420 - 4722 (-)
Type: TC
Location: 4420 - 4722 (-)
Gene ID: k141_98529_6
Type: TC
Location: 4875 - 6227 (-)
Type: TC
Location: 4875 - 6227 (-)
Gene ID: k141_98529_7
Type: CAZyme
Location: 6348 - 7748 (-)
Type: CAZyme
Location: 6348 - 7748 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.