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Cluster: CGMR011961_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_80680 k141_80680_15 18060 19844 + 9.B.33.1.1
TC k141_80680 k141_80680_16 19993 21282 + 3.A.1.1.4
TC k141_80680 k141_80680_17 21365 22237 + 3.A.1.1.4
TC k141_80680 k141_80680_18 22234 23058 + 3.A.1.1.4
TF k141_80680 k141_80680_19 23734 24765 + LacI
STP k141_80680 k141_80680_20 24897 26156 + SBP_bac_1
TC k141_80680 k141_80680_21 26244 27164 + 3.A.1.1.7
TC k141_80680 k141_80680_22 27164 27991 + 3.A.1.1.18
CAZyme k141_80680 k141_80680_23 28023 29324 + GH4
Gene ID: k141_80680_15
Type: TC
Location: 18060 - 19844 (+)
Gene ID: k141_80680_16
Type: TC
Location: 19993 - 21282 (+)
Gene ID: k141_80680_17
Type: TC
Location: 21365 - 22237 (+)
Gene ID: k141_80680_18
Type: TC
Location: 22234 - 23058 (+)
Gene ID: k141_80680_19
Type: TF
Location: 23734 - 24765 (+)
Gene ID: k141_80680_20
Type: STP
Location: 24897 - 26156 (+)
Gene ID: k141_80680_21
Type: TC
Location: 26244 - 27164 (+)
Gene ID: k141_80680_22
Type: TC
Location: 27164 - 27991 (+)
Gene ID: k141_80680_23
Type: CAZyme
Location: 28023 - 29324 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Bacillales_A
→
Family
Planococcaceae
→
Genus
Sporosarcina
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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