Cluster: CGMR011961_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011961
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_207713 | k141_207713_8 | 6842 | 7339 | + | 4.A.1.2.6 |
| TC | k141_207713 | k141_207713_9 | 7357 | 8763 | + | 4.A.1.2.8 |
| CAZyme | k141_207713 | k141_207713_10 | 9000 | 10658 | + | GH13_29 |
| TF | k141_207713 | k141_207713_11 | 10671 | 11384 | + | GntR |
| TF | k141_207713 | k141_207713_12 | 11438 | 11977 | - | 0040266 |
| TC | k141_207713 | k141_207713_13 | 12196 | 13458 | + | 3.A.1.12.2 |
| TC | k141_207713 | k141_207713_14 | 13451 | 14302 | + | 3.A.1.12.2 |
| TC | k141_207713 | k141_207713_15 | 14299 | 15222 | + | 3.A.1.12.2 |
Gene ID: k141_207713_8
Type: TC
Location: 6842 - 7339 (+)
Type: TC
Location: 6842 - 7339 (+)
Gene ID: k141_207713_9
Type: TC
Location: 7357 - 8763 (+)
Type: TC
Location: 7357 - 8763 (+)
Gene ID: k141_207713_10
Type: CAZyme
Location: 9000 - 10658 (+)
Type: CAZyme
Location: 9000 - 10658 (+)
Gene ID: k141_207713_11
Type: TF
Location: 10671 - 11384 (+)
Type: TF
Location: 10671 - 11384 (+)
Gene ID: k141_207713_12
Type: TF
Location: 11438 - 11977 (-)
Type: TF
Location: 11438 - 11977 (-)
Gene ID: k141_207713_13
Type: TC
Location: 12196 - 13458 (+)
Type: TC
Location: 12196 - 13458 (+)
Gene ID: k141_207713_14
Type: TC
Location: 13451 - 14302 (+)
Type: TC
Location: 13451 - 14302 (+)
Gene ID: k141_207713_15
Type: TC
Location: 14299 - 15222 (+)
Type: TC
Location: 14299 - 15222 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Bacillales_A
Family
Planococcaceae
Genus
Sporosarcina
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.