Cluster: CGMR011961_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR011961
- CGC Family ID: CGCFAM_01183
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_195231 | k141_195231_7 | 8941 | 10053 | - | GT4 |
| CAZyme | k141_195231 | k141_195231_8 | 10071 | 10799 | - | GT26 |
| pfam | k141_195231 | k141_195231_9 | 11109 | 12500 | + | O-antigen_lig |
| pfam | k141_195231 | k141_195231_10 | 12611 | 13408 | - | LicD |
| TC | k141_195231 | k141_195231_11 | 13588 | 15045 | + | 2.A.66.2.22 |
| CAZyme | k141_195231 | k141_195231_12 | 15076 | 15909 | + | GT2 |
| TC | k141_195231 | k141_195231_13 | 16092 | 17081 | - | 9.B.97.1.7 |
Gene ID: k141_195231_7
Type: CAZyme
Location: 8941 - 10053 (-)
Type: CAZyme
Location: 8941 - 10053 (-)
Gene ID: k141_195231_8
Type: CAZyme
Location: 10071 - 10799 (-)
Type: CAZyme
Location: 10071 - 10799 (-)
Gene ID: k141_195231_9
Type: pfam
Location: 11109 - 12500 (+)
Type: pfam
Location: 11109 - 12500 (+)
Gene ID: k141_195231_10
Type: pfam
Location: 12611 - 13408 (-)
Type: pfam
Location: 12611 - 13408 (-)
Gene ID: k141_195231_11
Type: TC
Location: 13588 - 15045 (+)
Type: TC
Location: 13588 - 15045 (+)
Gene ID: k141_195231_12
Type: CAZyme
Location: 15076 - 15909 (+)
Type: CAZyme
Location: 15076 - 15909 (+)
Gene ID: k141_195231_13
Type: TC
Location: 16092 - 17081 (-)
Type: TC
Location: 16092 - 17081 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Bacillales_A
Family
Planococcaceae
Genus
Sporosarcina
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.