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Cluster: CGMR011961_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_45580 k141_45580_2 748 2067 + 3.A.1.1.45
TC k141_45580 k141_45580_3 2309 3169 + 3.A.1.1.45
TC k141_45580 k141_45580_4 3169 3987 + 3.A.1.1.45
TF k141_45580 k141_45580_5 4008 5033 + LacI
pfam k141_45580 k141_45580_6 5113 5829 + ThuA
CAZyme k141_45580 k141_45580_7 5854 6882 + GH179
pfam k141_45580 k141_45580_8 7104 8072 + AP_endonuc_2
CAZyme k141_45580 k141_45580_9 8250 9344 + GH179
TF k141_45580 k141_45580_10 9552 10535 + LacI
pfam k141_45580 k141_45580_11 10614 11384 + AP_endonuc_2
CAZyme k141_45580 k141_45580_12 11406 12431 + GH179
Gene ID: k141_45580_2
Type: TC
Location: 748 - 2067 (+)
Gene ID: k141_45580_3
Type: TC
Location: 2309 - 3169 (+)
Gene ID: k141_45580_4
Type: TC
Location: 3169 - 3987 (+)
Gene ID: k141_45580_5
Type: TF
Location: 4008 - 5033 (+)
Gene ID: k141_45580_6
Type: pfam
Location: 5113 - 5829 (+)
Gene ID: k141_45580_7
Type: CAZyme
Location: 5854 - 6882 (+)
Gene ID: k141_45580_8
Type: pfam
Location: 7104 - 8072 (+)
Gene ID: k141_45580_9
Type: CAZyme
Location: 8250 - 9344 (+)
Gene ID: k141_45580_10
Type: TF
Location: 9552 - 10535 (+)
Gene ID: k141_45580_11
Type: pfam
Location: 10614 - 11384 (+)
Gene ID: k141_45580_12
Type: CAZyme
Location: 11406 - 12431 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Bacillales_A
→
Family
Planococcaceae
→
Genus
Sporosarcina
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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