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Cluster: CGMR011961_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_48381 k141_48381_3 1670 2638 + 3.A.1.1.20
TC k141_48381 k141_48381_4 2655 3494 + 3.A.1.1.34
STP k141_48381 k141_48381_5 3570 4883 + SBP_bac_1
TC k141_48381 k141_48381_6 4964 6748 + 8.A.59.2.1
TF k141_48381 k141_48381_7 6752 8374 + HTH_AraC | HTH_AraC
TC k141_48381 k141_48381_8 8582 9211 - 9.B.28.1.5
CAZyme k141_48381 k141_48381_9 9653 10813 + GH177
CAZyme k141_48381 k141_48381_10 10877 11884 + GH177
pfam k141_48381 k141_48381_11 11884 12744 + AP_endonuc_2
TC k141_48381 k141_48381_12 12949 14427 + 2.A.2.1.1
TC k141_48381 k141_48381_13 14589 15995 + 2.A.2.3.9
Gene ID: k141_48381_3
Type: TC
Location: 1670 - 2638 (+)
Gene ID: k141_48381_4
Type: TC
Location: 2655 - 3494 (+)
Gene ID: k141_48381_5
Type: STP
Location: 3570 - 4883 (+)
Gene ID: k141_48381_6
Type: TC
Location: 4964 - 6748 (+)
Gene ID: k141_48381_7
Type: TF
Location: 6752 - 8374 (+)
Gene ID: k141_48381_8
Type: TC
Location: 8582 - 9211 (-)
Gene ID: k141_48381_9
Type: CAZyme
Location: 9653 - 10813 (+)
Gene ID: k141_48381_10
Type: CAZyme
Location: 10877 - 11884 (+)
Gene ID: k141_48381_11
Type: pfam
Location: 11884 - 12744 (+)
Gene ID: k141_48381_12
Type: TC
Location: 12949 - 14427 (+)
Gene ID: k141_48381_13
Type: TC
Location: 14589 - 15995 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Bacillales_A
→
Family
Planococcaceae
→
Genus
Sporosarcina
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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