Cluster: CGMR011961_CGC12
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011961
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_156550 | k141_156550_1 | 2 | 1066 | + | 3.A.1.5.11 |
| STP | k141_156550 | k141_156550_2 | 1087 | 2898 | + | SBP_bac_5 |
| CAZyme | k141_156550 | k141_156550_3 | 2972 | 3772 | - | CE4 |
| pfam | k141_156550 | k141_156550_4 | 4226 | 4786 | + | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 |
| STP | k141_156550 | k141_156550_5 | 4943 | 5998 | - | Pyr_redox_2 |
| TC | k141_156550 | k141_156550_6 | 6036 | 6854 | - | 3.A.1.14.22 |
| TC | k141_156550 | k141_156550_7 | 6946 | 7992 | - | 3.A.1.14.2 |
| TC | k141_156550 | k141_156550_8 | 8044 | 9114 | - | 3.A.1.14.22 |
Gene ID: k141_156550_1
Type: TC
Location: 2 - 1066 (+)
Type: TC
Location: 2 - 1066 (+)
Gene ID: k141_156550_2
Type: STP
Location: 1087 - 2898 (+)
Type: STP
Location: 1087 - 2898 (+)
Gene ID: k141_156550_3
Type: CAZyme
Location: 2972 - 3772 (-)
Type: CAZyme
Location: 2972 - 3772 (-)
Gene ID: k141_156550_4
Type: pfam
Location: 4226 - 4786 (+)
Type: pfam
Location: 4226 - 4786 (+)
Gene ID: k141_156550_5
Type: STP
Location: 4943 - 5998 (-)
Type: STP
Location: 4943 - 5998 (-)
Gene ID: k141_156550_6
Type: TC
Location: 6036 - 6854 (-)
Type: TC
Location: 6036 - 6854 (-)
Gene ID: k141_156550_7
Type: TC
Location: 6946 - 7992 (-)
Type: TC
Location: 6946 - 7992 (-)
Gene ID: k141_156550_8
Type: TC
Location: 8044 - 9114 (-)
Type: TC
Location: 8044 - 9114 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Bacillales_A
Family
Planococcaceae
Genus
Sporosarcina
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.